Our Research

Yan, Ming, Andersen, Thea O., Pope, Phillip B., Yu, Zhongtang (2025) Probing the eukaryotic microbes of ruminants with a deep-learning classifier and comprehensive protein databases. Genome Research, 35 (2), pp.368-378.

Coelho, Luis Pedro (2024) For long-term sustainable software in bioinformatics. PLoS Computational Biology, 20 (3), pp.Article number: e1011920.

Wu, Mengxiong, Li, Jie, Lai, Chun-Yu, Leu, Andy, Sun, Shengjie, Gu, Rui, Erler, Dirk V., Liu, Lian, Li, Lin, Tyson, Gene, et al. (2024) Nitrate-driven anaerobic oxidation of ethane and butane by bacteria. The ISME Journal, 18 (1), pp.Article number: wrad011.

Roseli, Ras Baizureen, Huang, Yen Hua, Henriques, Sónia Troeira, Kaas, Quentin, Craik, David J. (2024) Molecular dynamics simulations support a preference of cyclotide kalata B1 for phosphatidylethanolamine phospholipids. Biochimica et Biophysica Acta - Biomembranes, 1866 (3), pp.Article number: 184268.

Tostado, Christopher P., Da Ong, Lucas Xian, Heng, Joel Jia Wei, Miccolis, Carlo, Chia, Shumei, Seow, Justine Jia Wen, Toh, Yi Chin, DasGupta, Ramanuj (2024) An AI-assisted integrated, scalable, single-cell phenomic-transcriptomic platform to elucidate intratumor heterogeneity against immune response. Bioengineering and Translational Medicine, 9 (2), pp.Article number: e10628.

Rodriguez del Rio, Alvaro, Giner-Lamia, Joaquin, Cantalapiedra, Carlos P., Botas, Jorge, Deng, Ziqi, Hernandez-Plaza, Ana, Munar-Palmer, Marti, Santamaria-Hernando, Saray, Rodriguez-Herva, Jose J., Ruscheweyh, Hans Joachim, et al. (2024) Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature, 626 (7998), pp.377-384.

Philippe, Grégoire Jean Baptiste, Huang, Yen Hua, Mittermeier, Anna, Brown, Christopher J., Kaas, Quentin, Ramlan, Siti Radhiah, Wang, Conan K., Lane, David, Loewer, Alexander, Troeira Henriques, Sónia, et al. (2024) Delivery to, and Reactivation of, the p53 Pathway in Cancer Cells Using a Grafted Cyclotide Conjugated with a Cell-Penetrating Peptide. Journal of Medicinal Chemistry, 67 (2), pp.1197-1208.

Wilson, Liam A., Melville, Jamie N., Pedroso, Marcelo M., Krco, Stefan, Hoelzle, Robert, Zaugg, Julian, Southam, Gordon, Virdis, Bernardino, Evans, Paul, Supper, Jenna, et al. (2024) Kinetic, electrochemical and spectral characterization of bacterial and archaeal rusticyanins; unexpected stability issues and consequences for applications in biotechnology. Journal of Inorganic Biochemistry, 256, pp.Article number: 112539.

Arora, Seep, Goralczyk, Anna, Andra, Sujana, Lim, Soon Yew John, Toh, Yi Chin (2024) Development of a Probability-Based In Vitro Eye Irritation Screening Platform. Bioengineering, 11 (4), pp.Article number: 315.

Messer, Lauren, Bourne, David G., Robbins, Steven J., Clay, Megan, Bell, Sara, McIlroy, Simon, Tyson, Gene (2024) A genome-centric view of the role of the Acropora kenti microbiome in coral health and resilience. Nature Communications, 15 (1), pp.Article number: 2902.